Protocols

The links on this page are protocols of how to carry out common image analysis tasks. If there’s something you would like to see added to this page, let us know via the suggestion box at the bottom of this page.

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Figure Preparation with Microscopy Data
  • General manual

Making videos/ animations for presentations
  • General manual

FIJI/ImageJ

Imaris
  • General manual

QuPath
  • General manual
  • Using a pipeline

CellProfiler

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