Image Analysis Workstations

The facility has 6 workstations dedicated to analysis of microscopy data. Details of these workstations can be found in the table below.

As of September 2020, one of these workstations, Holycow, can be physically accessed in CG.06 but the other computers can only be used remotely. See this link for how to remote in and our manual for accessing Bioimage Analysis from home. Please remember to book your workstation on PPMS too.

Booking of the image analysis workstations is done on our booking system, PPMS. To find out more about PPMS, including account creation, check out the relevant section of our AIR Access page.


NameLocationSoftwareGood For..
Wee Beastie Remote access onlyCellProfiler
FIJI
Huygens
Imaris
QuPath
Large data
Light sheet reconstruction
HolycowCG.06CellProfiler
FIJI
Imaris
NIS-Elements (inc. SIM reconstruction)
QuPath
Volocity
Imaris
SIM Reconstruction
Volocity
CleopatraRemote access onlyFIJI
Imaris
NIS-Elements (inc. deconvolution)
QuPath
Volocity
Deconvolution
Volocity
HullabalooRemote access onlyDefiniens
FIJI
Imaris
NIS-Elements
(inc SIM deconvolution)
NIS-Deconvolution
Definiens

The main image analysis workstation room is CG.03. If you are unsure about where this is then please see the Facility Map.

Click here to find out about more about the software installed on the workstations, including facility produced manuals and videos that will help you get started.

%d bloggers like this: